Toquenaga, Yukihiko. "Special Feature: Preface Bayesian, Fisherian, Error, And Evidential Statistical Approaches For Population Ecology." Population Ecology 58.1 (2016): 3-8
Carrasco, Luis, Yukihiko Toquenaga, and Miyuki Mashiko. "Extrapolation of random forest models shows scale adaptation in egret colony site selection against landscape complexity." Ecological Complexity 24 (2015): 29-36.
Ohashi, Kazuharu, Takashi T. Makino, and Kentaro Arikawa. "Floral colour change in the eyes of pollinators: testing possible constraints and correlated evolution." Functional Ecology (2015).
Carrasco, Luis, Miyuki Mashiko, and Yukihiko Toquenaga. "Application of random forest algorithm for studying habitat selection of colonial herons and egrets in human-influenced landscapes." Ecological Research 29.3 (2014): 483-491.
Miyuki Mashiko and Yukihiko Toquenaga. "Grey Heron (Ardea cinerea) Expansion Promotes the Persistence of Mixed-Species Heron Colonies." Waterbirds 37.4 (2014): 362-370.
Suzuki, Miki F., and Kazuharu Ohashi. "How does a floral colour‐changing species differ from its non‐colour‐changing congener?–a comparison of trait combinations and their effects on pollination." Functional Ecology 28.3 (2014): 549-560.
Katsuki, Masako, Yukihiko Toquenaga, and Takahisa Miyatake. "Larval competition causes the difference in male ejaculate expenditure in Callosobruchus maculatus." Population Ecology 55.3 (2013): 493-498.
Mashiko, Miyuki, and Yukihiko Toquenaga. "Increasing variation in population size and species composition ratio in mixed-species heron colonies in Japan." Forktail 29 (2013): 71-77.
Mashiko, Miyuki, et al. "Natural Hybridization between a Little Egret (Egretta garzetta) and a Chinese Pond Heron (Ardeola bacchus) in Japan." Waterbirds 35.1 (2012): 160-163.
Ohashi, Kazuharu, Alison Leslie, and James D. Thomson. "Trapline foraging by bumble bees: VII. Adjustments for foraging success following competitor removal." Behavioral ecology (2012): ars200.
Ohashi, Kazuharu, and James D. Thomson. "Trapline foraging by bumble bees: VI. Behavioral alterations under speed–accuracy trade-offs." Behavioral ecology (2012): ars152.
Kondo, Natsuko I., et al. "Wolbachia infections in world populations of bean beetles (Coleoptera: Chrysomelidae: Bruchinae) infesting cultivated and wild legumes." Zoological science 28.7 (2011): 501-508.
Mano, Hiroyuki, and Yukihiko Toquenaga. "Contest‐type competition between age classes in scramble‐type Callosobruchus maculatus (Coleoptera: Bruchidae)." Entomological science 14.2 (2011): 166-172.
Munidasa, Dulee Tamirei, and Yukihiko Toquenaga. "Do pollen diets vary among adjacent bumble bee colonies?." Ecological research 25.3 (2010): 639-646.
Toquenaga, Yukihiko, and Nozomu Kokuvo. "Full-sib reconstruction in haplodiploid populations." Applied Entomology and Zoology 45.1 (2010): 59-64.
Ohashi, Kazuharu, Daniel D’Souza, and James D. Thomson. "An automated system for tracking and identifying individual nectar foragers at multiple feeders." Behavioral ecology and sociobiology 64.5 (2010): 891-897.
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